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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911570.1_cds_XP_016461555.1_54865
CDS Infomation

[gene=LOC107784880] [db_xref=GeneID:107784880] [protein=laccase-12-like isoform X1] [protein_id=XP_016461555.1] [location=join(30350..30460,30553..30704,30815..31059,31225..31353,31664..32817)] [gbkey=CDS]
Sequence

ATGGAGGCCTTCAACAGCATTGCCAACCCTTTGAGTTCTTTCTTCTTTATGTGCATTTTG
CTTCTCTTGGCAAATGCAGCATCTGCGAAAACTCACCACCATGATTTTGTTATTCAAGCA
ACACCAGTGAAGAGGCTGTGCATGACTCACAACACCATAACGGTGAATGGACAATTCCCT
GGACCAACATTAGAAGTAAACAATGGTGATACTCTGGTCGTCAAGGTTGTCAATAAAGCT
CAATACAATGTCACCATTCACTGGCATGGGGTAAGGCAGATTAGGACAGGATGGGCAGAT
GGACCAGAATTTATCACTCAGTGCCCAATTAGACCAGGAAAGAGTTACACTTACCGGTTT
ACCATTCAAGGACAGGAAGGGACTCTTTGGTGGCACGCTCACAGCTCGTGGCTCAGGGCC
ACTGTTTATGGAGCTCTAATTATCCACCCCAAAGAAGGAGACTCATATCCATTTCCTAAG
CCCAAAAGAGAAACGCCAATTCTTCTAGGTGAGTGGTGGGATGCAAACCCTATTGACGTT
ATAAGACGAGCTACAAGAACAGGAGCACCTCCTAATGTATCTGATGCATACACCATTAAT
GGTCAACCAGGTGACCTCTACAAGTGTTCCAGTCAAGATACTACCATCGTCCCTGTGGAC
TCGGGTGAAACCAACCTCCTCCGAGTTATCAACGCTGCACTCAACCAACAACTTTTCTTT
TCCGTCGCCAACCACAAACTTACTGTTGTTGGAGCAGATGCCTCTTATGTTAAACCCTTC
ACAACATCAGTCCTTATGCTCGGACCAGGCCAGACAACTGACGTCCTAATCACAACTGAT
CAGCCACGAGCCAAATATTACATGGCAGCACGTGCCTATGCTAGCGCTCAAGGCGCCCCC
TTTGATAATACCACAACCACTGCCATCCTTGAGTACAAGACAGCTTCTTGTTCTTCTAAT
TGTGTCAAGACCAATCCAGTTTTCCCATCTCTACCAGCATATAATGACACGGCCACTGCT
ACAGCCTTCACAACCAAATTCAGAAGCCCGAGAAAGGTCGAGGTGCCCACTGAAATTGAC
GAAAATCTATTCTTCACAGTTGGGCTGGGACTGAACAACTGCCCAAGAGGTGCAAGCTCG
AGTAATTGTCAAGGTCCAAATGGCACTCGATTCGCTGCCAGTATGAACAATGTATCTTTT
GTGCTACCATCCAACTTTTCCCTGCTACAAGCACATCACCAAGGAATACCTGGTGTCTTC
TCAACTGATTTCCCAGCAAACCCTCCTGTAAAATTTGATTACACGGGTAACGTAAGCCGA
TCACTCTGGCAACCCGTTCCAGGAACAAAGCTGTACAAACTGAAATATGGCGCAAGAGTG
CAGGTTGTGTTACAGGGGACAAGCATATTTACAGCTGAGAACCACCCAATTCATCTCCAC
GGATATGATTTTTACATCATTGCGGAGGGTTTCGGTAACTTTAATCCCAAAAGAGATACA
GCTAAATTCAACCTTATTGATCCACCTCTCAGAAATACGGCCAGTGTACCCGTCAATGGA
TGGGCAGTCATCAGATTTGTCGCTGACAATCCAGGTAAGAGAATAGATAGAGGGAAACAA
GTACTCACATCTCCAAATATTCCCAACTTTTTTCTATACCATGTCATATTTCAATGCTAC
AAATTAACTCATATTATTGACTTAACCAGGAGTGTGGCTAATGCATTGTCACTTGGATGT
TCACATTGGCTGGGGTTTGGCGATGGCGTTCCTTGTGGAAAACGGAGTTAG

Peptide Sequence

PEP ID

XP_016461555.1
PEP Infomation

PREDICTED: laccase-12-like isoform X1 [Nicotiana tabacum]
Sequence

MEAFNSIANPLSSFFFMCILLLLANAASAKTHHHDFVIQATPVKRLCMTHNTITVNGQFP
GPTLEVNNGDTLVVKVVNKAQYNVTIHWHGVRQIRTGWADGPEFITQCPIRPGKSYTYRF
TIQGQEGTLWWHAHSSWLRATVYGALIIHPKEGDSYPFPKPKRETPILLGEWWDANPIDV
IRRATRTGAPPNVSDAYTINGQPGDLYKCSSQDTTIVPVDSGETNLLRVINAALNQQLFF
SVANHKLTVVGADASYVKPFTTSVLMLGPGQTTDVLITTDQPRAKYYMAARAYASAQGAP
FDNTTTTAILEYKTASCSSNCVKTNPVFPSLPAYNDTATATAFTTKFRSPRKVEVPTEID
ENLFFTVGLGLNNCPRGASSSNCQGPNGTRFAASMNNVSFVLPSNFSLLQAHHQGIPGVF
STDFPANPPVKFDYTGNVSRSLWQPVPGTKLYKLKYGARVQVVLQGTSIFTAENHPIHLH
GYDFYIIAEGFGNFNPKRDTAKFNLIDPPLRNTASVPVNGWAVIRFVADNPGKRIDRGKQ
VLTSPNIPNFFLYHVIFQCYKLTHIIDLTRSVANALSLGCSHWLGFGDGVPCGKRS

Transcript Sequence

Gene sequence data has not been registered.